Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSI1O43347 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.16■□□□□ 0.34
MSI1O43347 PCGF3-213ENST00000620529 1899 ntBASIC17.16■□□□□ 0.34
MSI1O43347 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSI1O43347 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
MSI1O43347 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MSI1O43347 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.15■□□□□ 0.34
MSI1O43347 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.15■□□□□ 0.34
MSI1O43347 PMS2P2-201ENST00000425039 1128 ntBASIC17.15■□□□□ 0.34
MSI1O43347 AC142381.1-201ENST00000426099 345 ntBASIC17.15■□□□□ 0.34
MSI1O43347 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.15■□□□□ 0.34
MSI1O43347 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 KRT8P23-201ENST00000560090 1207 ntBASIC17.15■□□□□ 0.34
MSI1O43347 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.15■□□□□ 0.34
MSI1O43347 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.15■□□□□ 0.34
MSI1O43347 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.15■□□□□ 0.34
MSI1O43347 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.15■□□□□ 0.34
MSI1O43347 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.15■□□□□ 0.34
MSI1O43347 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.15■□□□□ 0.34
MSI1O43347 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 FOXO1B-201ENST00000504678 1527 ntBASIC17.15■□□□□ 0.34
MSI1O43347 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.15■□□□□ 0.34
MSI1O43347 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
MSI1O43347 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.15■□□□□ 0.34
MSI1O43347 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.15■□□□□ 0.34
MSI1O43347 AC084018.2-201ENST00000613093 2607 ntBASIC17.15■□□□□ 0.34
MSI1O43347 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MSI1O43347 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.14■□□□□ 0.33
MSI1O43347 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.14■□□□□ 0.33
MSI1O43347 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.14■□□□□ 0.33
MSI1O43347 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.14■□□□□ 0.33
MSI1O43347 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.14■□□□□ 0.33
MSI1O43347 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.14■□□□□ 0.33
MSI1O43347 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.14■□□□□ 0.33
MSI1O43347 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.14■□□□□ 0.33
MSI1O43347 AC020765.3-201ENST00000613051 740 ntBASIC17.14■□□□□ 0.33
MSI1O43347 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 LINC00628-201ENST00000628516 1289 ntBASIC17.14■□□□□ 0.33
MSI1O43347 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
MSI1O43347 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms