Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC20.93■□□□□ 0.94
ABCC4O15439 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ABCC4O15439 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.93■□□□□ 0.94
ABCC4O15439 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ABCC4O15439 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ABCC4O15439 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
ABCC4O15439 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.93■□□□□ 0.94
ABCC4O15439 POU5F1P6-201ENST00000466990 990 ntBASIC20.93■□□□□ 0.94
ABCC4O15439 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.93■□□□□ 0.94
ABCC4O15439 RN7SL204P-201ENST00000582831 262 ntBASIC20.93■□□□□ 0.94
ABCC4O15439 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.93■□□□□ 0.94
ABCC4O15439 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 AF228730.6-201ENST00000641497 218 ntBASIC20.93■□□□□ 0.94
ABCC4O15439 AC084121.3-201ENST00000641716 218 ntBASIC20.93■□□□□ 0.94
ABCC4O15439 AC105233.6-201ENST00000642093 218 ntBASIC20.93■□□□□ 0.94
ABCC4O15439 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCC4O15439 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.93■□□□□ 0.94
ABCC4O15439 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.92■□□□□ 0.94
ABCC4O15439 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.92■□□□□ 0.94
ABCC4O15439 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.92■□□□□ 0.94
ABCC4O15439 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
ABCC4O15439 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.92■□□□□ 0.94
ABCC4O15439 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC20.92■□□□□ 0.94
ABCC4O15439 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.92■□□□□ 0.94
ABCC4O15439 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC20.92■□□□□ 0.94
ABCC4O15439 AC015922.1-201ENST00000421102 1152 ntBASIC20.92■□□□□ 0.94
ABCC4O15439 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC20.92■□□□□ 0.94
ABCC4O15439 AC093724.1-201ENST00000448659 1027 ntBASIC20.92■□□□□ 0.94
ABCC4O15439 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 AC190387.1-201ENST00000551683 408 ntBASIC20.92■□□□□ 0.94
ABCC4O15439 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.92■□□□□ 0.94
ABCC4O15439 AL390754.1-201ENST00000619088 582 ntBASIC20.92■□□□□ 0.94
ABCC4O15439 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC20.92■□□□□ 0.94
ABCC4O15439 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ABCC4O15439 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.92■□□□□ 0.94
ABCC4O15439 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCC4O15439 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
ABCC4O15439 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.91■□□□□ 0.94
ABCC4O15439 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.91■□□□□ 0.94
ABCC4O15439 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.91■□□□□ 0.94
ABCC4O15439 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.91■□□□□ 0.94
ABCC4O15439 TSPY16P-201ENST00000449843 468 ntBASIC20.91■□□□□ 0.94
ABCC4O15439 KRT18P34-201ENST00000488218 1270 ntBASIC20.91■□□□□ 0.94
ABCC4O15439 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.91■□□□□ 0.94
ABCC4O15439 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC20.91■□□□□ 0.94
ABCC4O15439 CCDC74BP1-201ENST00000508880 1123 ntBASIC20.91■□□□□ 0.94
ABCC4O15439 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC20.91■□□□□ 0.94
ABCC4O15439 POLD4-211ENST00000539074 714 ntTSL 3 BASIC20.91■□□□□ 0.94
ABCC4O15439 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
ABCC4O15439 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.91■□□□□ 0.94
ABCC4O15439 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ABCC4O15439 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 CYP2T1P-202ENST00000641596 2535 ntBASIC20.91■□□□□ 0.94
ABCC4O15439 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.91■□□□□ 0.94
ABCC4O15439 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
ABCC4O15439 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC20.91■□□□□ 0.94
ABCC4O15439 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.91■□□□□ 0.94
ABCC4O15439 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ABCC4O15439 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
ABCC4O15439 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCC4O15439 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms