Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PCDHB17P-201ENST00000539533 2393 ntBASIC15.83■□□□□ 0.12
PCDH17O14917 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDH17O14917 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH17O14917 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH17O14917 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.83■□□□□ 0.12
PCDH17O14917 FAM58CP-201ENST00000435741 640 ntBASIC15.83■□□□□ 0.12
PCDH17O14917 AP000344.2-201ENST00000512987 629 ntBASIC15.83■□□□□ 0.12
PCDH17O14917 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PCDH17O14917 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDH17O14917 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDH17O14917 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDH17O14917 AC091812.2-201ENST00000619081 385 ntBASIC15.83■□□□□ 0.12
PCDH17O14917 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
PCDH17O14917 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDH17O14917 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDH17O14917 FRMD8P1-201ENST00000440433 1524 ntBASIC15.83■□□□□ 0.12
PCDH17O14917 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH17O14917 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDH17O14917 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.83■□□□□ 0.12
PCDH17O14917 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDH17O14917 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH17O14917 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDH17O14917 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
PCDH17O14917 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
PCDH17O14917 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH17O14917 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCDH17O14917 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 AL513477.1-201ENST00000602865 2407 ntBASIC15.82■□□□□ 0.12
PCDH17O14917 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 CEND1P1-201ENST00000451006 455 ntBASIC15.82■□□□□ 0.12
PCDH17O14917 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH17O14917 ALG1L5P-201ENST00000482043 771 ntBASIC15.82■□□□□ 0.12
PCDH17O14917 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
PCDH17O14917 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH17O14917 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 SNHG9-202ENST00000564014 471 ntBASIC15.82■□□□□ 0.12
PCDH17O14917 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 AP002472.1-201ENST00000577490 586 ntBASIC15.82■□□□□ 0.12
PCDH17O14917 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH17O14917 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH17O14917 AL161645.1-201ENST00000622716 1255 ntBASIC15.82■□□□□ 0.12
PCDH17O14917 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDH17O14917 KRT18P28-201ENST00000453838 1332 ntBASIC15.82■□□□□ 0.12
PCDH17O14917 PCDHA1-201ENST00000378133 2726 ntBASIC15.82■□□□□ 0.12
PCDH17O14917 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDH17O14917 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDH17O14917 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDH17O14917 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDH17O14917 AC092364.2-201ENST00000596710 2692 ntBASIC15.81■□□□□ 0.12
PCDH17O14917 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PCDH17O14917 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDH17O14917 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PCDH17O14917 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.81■□□□□ 0.12
PCDH17O14917 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PCDH17O14917 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.81■□□□□ 0.12
PCDH17O14917 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms