Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.06■□□□□ 0.16
UBFD1O14562 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.06■□□□□ 0.16
UBFD1O14562 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.06■□□□□ 0.16
UBFD1O14562 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 LINC01711-201ENST00000598340 967 ntBASIC16.06■□□□□ 0.16
UBFD1O14562 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 AL356488.2-201ENST00000602755 427 ntBASIC16.06■□□□□ 0.16
UBFD1O14562 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 AC020765.3-201ENST00000613051 740 ntBASIC16.06■□□□□ 0.16
UBFD1O14562 AC008735.5-201ENST00000623544 497 ntBASIC16.06■□□□□ 0.16
UBFD1O14562 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
UBFD1O14562 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
UBFD1O14562 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
UBFD1O14562 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
UBFD1O14562 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.05■□□□□ 0.16
UBFD1O14562 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UBFD1O14562 AC069224.1-201ENST00000566372 1715 ntBASIC16.05■□□□□ 0.16
UBFD1O14562 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.05■□□□□ 0.16
UBFD1O14562 AC005622.1-201ENST00000636801 1703 ntBASIC16.05■□□□□ 0.16
UBFD1O14562 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
UBFD1O14562 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBFD1O14562 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.05■□□□□ 0.16
UBFD1O14562 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBFD1O14562 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBFD1O14562 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBFD1O14562 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBFD1O14562 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
UBFD1O14562 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
UBFD1O14562 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.05■□□□□ 0.16
UBFD1O14562 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.05■□□□□ 0.16
UBFD1O14562 AC073648.2-201ENST00000510116 352 ntBASIC16.05■□□□□ 0.16
UBFD1O14562 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
UBFD1O14562 ACTL9-202ENST00000612068 1252 ntBASIC16.05■□□□□ 0.16
UBFD1O14562 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.05■□□□□ 0.16
UBFD1O14562 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBFD1O14562 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.05■□□□□ 0.16
UBFD1O14562 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBFD1O14562 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
UBFD1O14562 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.05■□□□□ 0.16
UBFD1O14562 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
UBFD1O14562 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
UBFD1O14562 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
UBFD1O14562 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
UBFD1O14562 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.04■□□□□ 0.16
UBFD1O14562 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
UBFD1O14562 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.04■□□□□ 0.16
UBFD1O14562 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
UBFD1O14562 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.04■□□□□ 0.16
UBFD1O14562 AC018712.1-201ENST00000455767 687 ntBASIC16.04■□□□□ 0.16
UBFD1O14562 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.04■□□□□ 0.16
UBFD1O14562 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.04■□□□□ 0.16
UBFD1O14562 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.04■□□□□ 0.16
UBFD1O14562 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
UBFD1O14562 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.04■□□□□ 0.16
UBFD1O14562 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
UBFD1O14562 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.04■□□□□ 0.16
UBFD1O14562 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms