Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 AL391256.1-201ENST00000443260 1855 ntBASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 AC078925.2-201ENST00000624013 1973 ntBASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 AC108073.2-201ENST00000464002 357 ntBASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 CIPC-205ENST00000555437 566 ntTSL 3 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 AC013467.2-201ENST00000605472 835 ntBASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 REXO1L3P-201ENST00000622202 1288 ntBASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 AC104640.1-201ENST00000562617 2109 ntBASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
HLA-DRB4X5D2U9 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
HLA-DRB4X5D2U9 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 AC098831.1-202ENST00000438821 336 ntBASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 AC009078.2-202ENST00000463353 338 ntBASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 RNA5SP419-201ENST00000515908 135 ntBASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 AL049840.3-201ENST00000602669 611 ntBASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 AC010654.1-201ENST00000615722 808 ntBASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DRB4X5D2U9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms