Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 AP001005.1-201ENST00000571755 1248 ntBASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 ME2P1-201ENST00000426028 1970 ntBASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 AL671710.1-201ENST00000610245 2349 ntBASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 AL512652.2-201ENST00000625156 1716 ntBASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHGA11Q9Y5H2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 MIR7706-201ENST00000613747 67 ntBASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHGA11Q9Y5H2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 GGT3P-204ENST00000453783 1664 ntBASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 AC092364.2-201ENST00000596710 2692 ntBASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDHGA11Q9Y5H2 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms