Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 SLC25A1P1-201ENST00000528351 927 ntBASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 GGTLC5P-201ENST00000617623 998 ntBASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.78■□□□□ 0.12
PCDHGB3Q9Y5G1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 LINC00895-201ENST00000629028 1637 ntBASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 PAWRP1-201ENST00000451083 565 ntBASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 FAM197Y3-203ENST00000618346 717 ntBASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 AL805961.1-202ENST00000641562 540 ntBASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCDHGB3Q9Y5G1 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 PI4KAP1-204ENST00000612579 1703 ntBASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
PCDHGB3Q9Y5G1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 TOP3BP1-201ENST00000420768 1380 ntBASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 ALOX12P2-203ENST00000570921 1945 ntBASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 PMS2P7-201ENST00000506558 1336 ntBASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 KRT18P27-201ENST00000427733 1299 ntBASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.76■□□□□ 0.11
PCDHGB3Q9Y5G1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms