Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VAPAQ9P0L0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 PRAL-201ENST00000624952 3286 ntBASIC15.68■□□□□ 0.1
VAPAQ9P0L0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 AC006504.4-201ENST00000592118 1568 ntBASIC15.68■□□□□ 0.1
VAPAQ9P0L0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 AL353732.1-201ENST00000569618 1459 ntBASIC15.68■□□□□ 0.1
VAPAQ9P0L0 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.68■□□□□ 0.1
VAPAQ9P0L0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 FGFR3P6-201ENST00000457012 610 ntBASIC15.68■□□□□ 0.1
VAPAQ9P0L0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 AL805961.1-202ENST00000641562 540 ntBASIC15.68■□□□□ 0.1
VAPAQ9P0L0 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VAPAQ9P0L0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 ELK2BP-201ENST00000415014 1224 ntBASIC15.67■□□□□ 0.1
VAPAQ9P0L0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.67■□□□□ 0.1
VAPAQ9P0L0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms