Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SNX5-217ENST00000606557 1087 ntBASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 AC097358.2-201ENST00000607541 1159 ntBASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
CDC42SE1Q9NRR8 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SP100-205ENST00000409824 1802 ntTSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC102953.2-201ENST00000609755 3026 ntBASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC087741.3-201ENST00000624270 1347 ntBASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC011474.4-201ENST00000623523 2076 ntBASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC114271.1-201ENST00000612689 2813 ntBASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC016027.1-202ENST00000607927 1699 ntBASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 HERC2P10-201ENST00000570209 2393 ntBASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC136428.2-201ENST00000563187 214 ntBASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 RCC2P6-201ENST00000526625 1557 ntBASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
CDC42SE1Q9NRR8 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms