Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 RPS15P9-201ENST00000494093 319 ntBASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SLC52A3Q9NQ40 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
SLC52A3Q9NQ40 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.1
SLC52A3Q9NQ40 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 KRT18P31-201ENST00000506277 1292 ntBASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 AC008608.2-201ENST00000606089 416 ntBASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 AC107918.4-202ENST00000641623 219 ntBASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC52A3Q9NQ40 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 AC020658.6-201ENST00000623564 1870 ntBASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 LAGE3P1-201ENST00000425356 484 ntBASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 GGTLC5P-201ENST00000617623 998 ntBASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 REXO1L6P-202ENST00000619970 1078 ntBASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC52A3Q9NQ40 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms