Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AC073648.2-201ENST00000510116 352 ntBASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 MIR1199-201ENST00000621445 119 ntBASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
TMEM38AQ9H6F2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 MRPL20P1-201ENST00000400819 433 ntBASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 AL356488.2-201ENST00000602755 427 ntBASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 AC005622.1-201ENST00000636801 1703 ntBASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEM38AQ9H6F2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
TMEM38AQ9H6F2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TMEM38AQ9H6F2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms