Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM2Q9C040 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.29■□□□□ 0.04
TRIM2Q9C040 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 AL662844.4-201ENST00000606367 2838 ntBASIC15.28■□□□□ 0.04
TRIM2Q9C040 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 MRPL20P1-201ENST00000400819 433 ntBASIC15.28■□□□□ 0.04
TRIM2Q9C040 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TRIM2Q9C040 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRIM2Q9C040 AL031731.1-201ENST00000642131 2094 ntBASIC15.28■□□□□ 0.04
TRIM2Q9C040 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 AL513523.2-202ENST00000427283 2040 ntBASIC15.27■□□□□ 0.04
TRIM2Q9C040 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRIM2Q9C040 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.27■□□□□ 0.04
TRIM2Q9C040 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRIM2Q9C040 MIR574-201ENST00000385209 96 ntBASIC15.27■□□□□ 0.04
TRIM2Q9C040 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM2Q9C040 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM2Q9C040 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRIM2Q9C040 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.27■□□□□ 0.04
TRIM2Q9C040 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM2Q9C040 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.27■□□□□ 0.04
TRIM2Q9C040 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRIM2Q9C040 AC023511.2-201ENST00000618803 211 ntBASIC15.27■□□□□ 0.04
TRIM2Q9C040 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRIM2Q9C040 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM2Q9C040 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM2Q9C040 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.27■□□□□ 0.03
TRIM2Q9C040 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.27■□□□□ 0.03
TRIM2Q9C040 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.27■□□□□ 0.03
TRIM2Q9C040 AC026691.1-201ENST00000602502 2017 ntBASIC15.27■□□□□ 0.03
TRIM2Q9C040 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM2Q9C040 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRIM2Q9C040 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM2Q9C040 MTHFR-217ENST00000641820 1569 ntBASIC15.27■□□□□ 0.03
TRIM2Q9C040 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM2Q9C040 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM2Q9C040 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM2Q9C040 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.27■□□□□ 0.03
TRIM2Q9C040 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRIM2Q9C040 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM2Q9C040 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.27■□□□□ 0.03
TRIM2Q9C040 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.27■□□□□ 0.03
TRIM2Q9C040 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRIM2Q9C040 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.26■□□□□ 0.03
TRIM2Q9C040 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms