Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 KRT8P39-201ENST00000396270 1433 ntBASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 AC103702.1-201ENST00000548801 2630 ntBASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDHD3Q9BSH5 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 AP002414.2-201ENST00000591780 3365 ntBASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 PRAL-201ENST00000624952 3286 ntBASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.02□□□□□ -0.16
HDHD3Q9BSH5 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 FAM210CP-201ENST00000445714 574 ntBASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 MTDHP3-201ENST00000594186 672 ntBASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 AL589182.2-201ENST00000619332 1049 ntBASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 REXO1L3P-201ENST00000622202 1288 ntBASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HDHD3Q9BSH5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 AC131009.4-201ENST00000624048 1740 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 SLC22A20-204ENST00000530038 1673 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 PTCHD3P3-201ENST00000403073 906 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 PMS2P1-201ENST00000431037 1228 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 SLC25A6P2-201ENST00000497974 877 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 SART3-203ENST00000546611 1184 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
HDHD3Q9BSH5 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms