Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
VRK1Q99986 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 PI4KAP1-204ENST00000612579 1703 ntBASIC14.72□□□□□ -0.05
VRK1Q99986 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
VRK1Q99986 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.72□□□□□ -0.05
VRK1Q99986 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 AC079328.2-201ENST00000561241 3354 ntBASIC14.71□□□□□ -0.05
VRK1Q99986 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 GPR89P-201ENST00000407924 1495 ntBASIC14.71□□□□□ -0.05
VRK1Q99986 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
VRK1Q99986 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
VRK1Q99986 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VRK1Q99986 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
VRK1Q99986 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 MRPL20P1-201ENST00000400819 433 ntBASIC14.71□□□□□ -0.05
VRK1Q99986 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.71□□□□□ -0.05
VRK1Q99986 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.71□□□□□ -0.05
VRK1Q99986 IGHV3-65-201ENST00000523210 341 ntBASIC14.71□□□□□ -0.05
VRK1Q99986 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
VRK1Q99986 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.71□□□□□ -0.05
VRK1Q99986 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.71□□□□□ -0.05
VRK1Q99986 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
VRK1Q99986 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
VRK1Q99986 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
VRK1Q99986 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.71□□□□□ -0.05
VRK1Q99986 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
VRK1Q99986 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
VRK1Q99986 AL136379.1-201ENST00000623471 2642 ntBASIC14.71□□□□□ -0.06
VRK1Q99986 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
VRK1Q99986 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VRK1Q99986 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VRK1Q99986 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
VRK1Q99986 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VRK1Q99986 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
VRK1Q99986 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
VRK1Q99986 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VRK1Q99986 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
VRK1Q99986 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
VRK1Q99986 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.7□□□□□ -0.06
VRK1Q99986 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK1Q99986 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
VRK1Q99986 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 UPF3AP3-201ENST00000420996 769 ntBASIC14.7□□□□□ -0.06
VRK1Q99986 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK1Q99986 VN2R19P-201ENST00000442399 1052 ntBASIC14.7□□□□□ -0.06
VRK1Q99986 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms