Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC084346.2-201ENST00000607097 949 ntBASIC17.53■□□□□ 0.4
RAD9AQ99638 MIR8072-201ENST00000614241 80 ntBASIC17.53■□□□□ 0.4
RAD9AQ99638 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAD9AQ99638 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAD9AQ99638 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAD9AQ99638 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAD9AQ99638 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.53■□□□□ 0.4
RAD9AQ99638 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.53■□□□□ 0.4
RAD9AQ99638 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.53■□□□□ 0.4
RAD9AQ99638 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RAD9AQ99638 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAD9AQ99638 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAD9AQ99638 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAD9AQ99638 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RAD9AQ99638 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.52■□□□□ 0.4
RAD9AQ99638 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.52■□□□□ 0.4
RAD9AQ99638 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.52■□□□□ 0.4
RAD9AQ99638 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
RAD9AQ99638 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
RAD9AQ99638 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
RAD9AQ99638 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.52■□□□□ 0.4
RAD9AQ99638 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
RAD9AQ99638 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.52■□□□□ 0.4
RAD9AQ99638 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RAD9AQ99638 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.52■□□□□ 0.4
RAD9AQ99638 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.52■□□□□ 0.4
RAD9AQ99638 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.52■□□□□ 0.4
RAD9AQ99638 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.52■□□□□ 0.4
RAD9AQ99638 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.52■□□□□ 0.4
RAD9AQ99638 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAD9AQ99638 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.52■□□□□ 0.39
RAD9AQ99638 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAD9AQ99638 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RAD9AQ99638 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.52■□□□□ 0.39
RAD9AQ99638 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
RAD9AQ99638 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
RAD9AQ99638 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.52■□□□□ 0.39
RAD9AQ99638 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 LTB4R2-202ENST00000528054 3092 ntBASIC17.51■□□□□ 0.39
RAD9AQ99638 AC068880.1-201ENST00000507289 2297 ntBASIC17.51■□□□□ 0.39
RAD9AQ99638 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RAD9AQ99638 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAD9AQ99638 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.51■□□□□ 0.39
RAD9AQ99638 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.51■□□□□ 0.39
RAD9AQ99638 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
RAD9AQ99638 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 KRT43P-201ENST00000434019 910 ntBASIC17.51■□□□□ 0.39
RAD9AQ99638 CROCCP4-201ENST00000457096 498 ntBASIC17.51■□□□□ 0.39
RAD9AQ99638 AC104596.2-201ENST00000512793 793 ntBASIC17.51■□□□□ 0.39
RAD9AQ99638 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 BTNL10-201ENST00000595971 695 ntBASIC17.51■□□□□ 0.39
RAD9AQ99638 AC020765.3-201ENST00000613051 740 ntBASIC17.51■□□□□ 0.39
RAD9AQ99638 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.51■□□□□ 0.39
RAD9AQ99638 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RAD9AQ99638 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RAD9AQ99638 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.51■□□□□ 0.39
RAD9AQ99638 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD9AQ99638 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
RAD9AQ99638 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.5■□□□□ 0.39
RAD9AQ99638 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.5■□□□□ 0.39
RAD9AQ99638 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RAD9AQ99638 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
RAD9AQ99638 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RAD9AQ99638 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.5■□□□□ 0.39
RAD9AQ99638 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.5■□□□□ 0.39
RAD9AQ99638 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms