Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 FAM210CP-201ENST00000445714 574 ntBASIC13.5□□□□□ -0.25
RAB40CQ96S21 AC022616.7-201ENST00000525383 220 ntBASIC13.5□□□□□ -0.25
RAB40CQ96S21 AC090616.6-201ENST00000582640 721 ntBASIC13.5□□□□□ -0.25
RAB40CQ96S21 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.5□□□□□ -0.25
RAB40CQ96S21 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40CQ96S21 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 AC246785.2-201ENST00000432512 513 ntBASIC13.49□□□□□ -0.25
RAB40CQ96S21 AL049597.2-201ENST00000565575 961 ntBASIC13.49□□□□□ -0.25
RAB40CQ96S21 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 AC011467.2-201ENST00000598425 242 ntBASIC13.49□□□□□ -0.25
RAB40CQ96S21 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40CQ96S21 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.49□□□□□ -0.25
RAB40CQ96S21 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.48□□□□□ -0.25
RAB40CQ96S21 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RAB40CQ96S21 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40CQ96S21 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms