Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 CSF2RBP1-201ENST00000447905 391 ntBASIC16.33■□□□□ 0.2
CLDN23Q96B33 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 AC103810.3-201ENST00000583567 96 ntBASIC16.33■□□□□ 0.2
CLDN23Q96B33 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 AL022328.1-201ENST00000610050 478 ntBASIC16.33■□□□□ 0.2
CLDN23Q96B33 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 AC068587.10-201ENST00000641210 219 ntBASIC16.33■□□□□ 0.2
CLDN23Q96B33 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN23Q96B33 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN23Q96B33 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN23Q96B33 Z97205.2-201ENST00000564697 1639 ntBASIC16.33■□□□□ 0.2
CLDN23Q96B33 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN23Q96B33 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN23Q96B33 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN23Q96B33 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN23Q96B33 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN23Q96B33 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN23Q96B33 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN23Q96B33 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 MIR5189-201ENST00000577370 114 ntBASIC16.32■□□□□ 0.2
CLDN23Q96B33 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.32■□□□□ 0.2
CLDN23Q96B33 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN23Q96B33 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 AC092053.1-201ENST00000605787 1936 ntBASIC16.31■□□□□ 0.2
CLDN23Q96B33 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 GPAA1P2-202ENST00000606848 1787 ntBASIC16.31■□□□□ 0.2
CLDN23Q96B33 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.31■□□□□ 0.2
CLDN23Q96B33 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 BRWD1P1-201ENST00000401091 371 ntBASIC16.31■□□□□ 0.2
CLDN23Q96B33 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.31■□□□□ 0.2
CLDN23Q96B33 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 AC133539.2-201ENST00000604757 467 ntBASIC16.31■□□□□ 0.2
CLDN23Q96B33 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN23Q96B33 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN23Q96B33 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN23Q96B33 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN23Q96B33 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms