Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NCLNQ969V3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.16■□□□□ 0.18
NCLNQ969V3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NCLNQ969V3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.16■□□□□ 0.18
NCLNQ969V3 AC243591.1-201ENST00000452967 1364 ntBASIC16.16■□□□□ 0.18
NCLNQ969V3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.16■□□□□ 0.18
NCLNQ969V3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.16■□□□□ 0.18
NCLNQ969V3 AL590627.1-203ENST00000421194 1026 ntBASIC16.16■□□□□ 0.18
NCLNQ969V3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NCLNQ969V3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.16■□□□□ 0.18
NCLNQ969V3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.16■□□□□ 0.18
NCLNQ969V3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.16■□□□□ 0.18
NCLNQ969V3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.16■□□□□ 0.18
NCLNQ969V3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.16■□□□□ 0.18
NCLNQ969V3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
NCLNQ969V3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.16■□□□□ 0.18
NCLNQ969V3 AC105339.3-201ENST00000560043 636 ntBASIC16.16■□□□□ 0.18
NCLNQ969V3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.16■□□□□ 0.18
NCLNQ969V3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.16■□□□□ 0.18
NCLNQ969V3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NCLNQ969V3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.16■□□□□ 0.18
NCLNQ969V3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.16■□□□□ 0.18
NCLNQ969V3 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NCLNQ969V3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.16■□□□□ 0.18
NCLNQ969V3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
NCLNQ969V3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.16■□□□□ 0.18
NCLNQ969V3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NCLNQ969V3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.16■□□□□ 0.18
NCLNQ969V3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.15■□□□□ 0.18
NCLNQ969V3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.15■□□□□ 0.18
NCLNQ969V3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 AC092364.2-201ENST00000596710 2692 ntBASIC16.15■□□□□ 0.18
NCLNQ969V3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.15■□□□□ 0.18
NCLNQ969V3 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NCLNQ969V3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.15■□□□□ 0.18
NCLNQ969V3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NCLNQ969V3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.15■□□□□ 0.18
NCLNQ969V3 AC092910.1-201ENST00000482027 1129 ntBASIC16.15■□□□□ 0.18
NCLNQ969V3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.15■□□□□ 0.18
NCLNQ969V3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
NCLNQ969V3 AC006557.2-201ENST00000592985 1240 ntBASIC16.15■□□□□ 0.18
NCLNQ969V3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.15■□□□□ 0.18
NCLNQ969V3 AC120114.3-201ENST00000611923 658 ntBASIC16.15■□□□□ 0.18
NCLNQ969V3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.15■□□□□ 0.18
NCLNQ969V3 AC116407.3-201ENST00000623905 1129 ntBASIC16.15■□□□□ 0.18
NCLNQ969V3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NCLNQ969V3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
NCLNQ969V3 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
NCLNQ969V3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.15■□□□□ 0.18
NCLNQ969V3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NCLNQ969V3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NCLNQ969V3 AL135999.2-201ENST00000622438 1686 ntBASIC16.14■□□□□ 0.18
NCLNQ969V3 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCLNQ969V3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NCLNQ969V3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms