Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
CNOT9Q92600 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 AC012569.1-201ENST00000591191 1524 ntBASIC15.31■□□□□ 0.04
CNOT9Q92600 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 AC008741.2-201ENST00000612792 3115 ntBASIC15.31■□□□□ 0.04
CNOT9Q92600 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CNOT9Q92600 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.31■□□□□ 0.04
CNOT9Q92600 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.31■□□□□ 0.04
CNOT9Q92600 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CNOT9Q92600 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CNOT9Q92600 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CNOT9Q92600 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CNOT9Q92600 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 VN2R19P-201ENST00000442399 1052 ntBASIC15.3■□□□□ 0.04
CNOT9Q92600 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.3■□□□□ 0.04
CNOT9Q92600 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.3■□□□□ 0.04
CNOT9Q92600 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.3■□□□□ 0.04
CNOT9Q92600 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.3■□□□□ 0.04
CNOT9Q92600 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CNOT9Q92600 LINC00554-201ENST00000564841 3011 ntBASIC15.3■□□□□ 0.04
CNOT9Q92600 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CNOT9Q92600 PCDHA1-201ENST00000378133 2726 ntBASIC15.3■□□□□ 0.04
CNOT9Q92600 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.29■□□□□ 0.04
CNOT9Q92600 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.29■□□□□ 0.04
CNOT9Q92600 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT9Q92600 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CNOT9Q92600 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CNOT9Q92600 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.29■□□□□ 0.04
CNOT9Q92600 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 IGLL3P-201ENST00000412472 434 ntBASIC15.29■□□□□ 0.04
CNOT9Q92600 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.29■□□□□ 0.04
CNOT9Q92600 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT9Q92600 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.29■□□□□ 0.04
CNOT9Q92600 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT9Q92600 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.29■□□□□ 0.04
CNOT9Q92600 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.29■□□□□ 0.04
CNOT9Q92600 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.29■□□□□ 0.04
CNOT9Q92600 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.29■□□□□ 0.04
CNOT9Q92600 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CNOT9Q92600 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CNOT9Q92600 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms