Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
AP3S1Q92572 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S1Q92572 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S1Q92572 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
AP3S1Q92572 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S1Q92572 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S1Q92572 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S1Q92572 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S1Q92572 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
AP3S1Q92572 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 AC012618.2-201ENST00000428058 849 ntBASIC14.64□□□□□ -0.07
AP3S1Q92572 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.64□□□□□ -0.07
AP3S1Q92572 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S1Q92572 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S1Q92572 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S1Q92572 AP003071.4-201ENST00000562276 1284 ntBASIC14.64□□□□□ -0.07
AP3S1Q92572 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.64□□□□□ -0.07
AP3S1Q92572 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S1Q92572 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S1Q92572 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.64□□□□□ -0.07
AP3S1Q92572 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.64□□□□□ -0.07
AP3S1Q92572 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
AP3S1Q92572 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.63□□□□□ -0.07
AP3S1Q92572 AL353593.2-201ENST00000602529 1483 ntBASIC14.63□□□□□ -0.07
AP3S1Q92572 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
AP3S1Q92572 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S1Q92572 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S1Q92572 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
AP3S1Q92572 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S1Q92572 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S1Q92572 KRT18P6-201ENST00000555540 1265 ntBASIC14.63□□□□□ -0.07
AP3S1Q92572 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
AP3S1Q92572 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.63□□□□□ -0.07
AP3S1Q92572 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.63□□□□□ -0.07
AP3S1Q92572 AL049637.2-201ENST00000641778 930 ntBASIC14.63□□□□□ -0.07
AP3S1Q92572 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
AP3S1Q92572 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
AP3S1Q92572 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 SSR4P1-203ENST00000599569 2260 ntBASIC14.63□□□□□ -0.07
AP3S1Q92572 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
AP3S1Q92572 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
AP3S1Q92572 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S1Q92572 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.63□□□□□ -0.07
AP3S1Q92572 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
AP3S1Q92572 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
AP3S1Q92572 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
AP3S1Q92572 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
AP3S1Q92572 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
AP3S1Q92572 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S1Q92572 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
AP3S1Q92572 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.62□□□□□ -0.07
AP3S1Q92572 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S1Q92572 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
AP3S1Q92572 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S1Q92572 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
AP3S1Q92572 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S1Q92572 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.62□□□□□ -0.07
AP3S1Q92572 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S1Q92572 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S1Q92572 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
AP3S1Q92572 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms