Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 LINC02199-201ENST00000506655 2702 ntBASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 POU5F1P6-201ENST00000466990 990 ntBASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 BCAR1-209ENST00000546196 1340 ntBASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDH19Q8TAB3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 KRT19P2-202ENST00000557173 1012 ntBASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 AL596087.1-201ENST00000400979 1969 ntBASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDH19Q8TAB3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
PCDH19Q8TAB3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH19Q8TAB3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH19Q8TAB3 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDH19Q8TAB3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDH19Q8TAB3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDH19Q8TAB3 REXO1L8P-201ENST00000604378 1897 ntBASIC17.08■□□□□ 0.33
PCDH19Q8TAB3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 AC040169.1-201ENST00000565382 521 ntBASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 AL009183.1-201ENST00000603760 355 ntBASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDH19Q8TAB3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms