Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 YBX1P2-201ENST00000489612 999 ntBASIC14.38□□□□□ -0.11
BEST4Q8NFU0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 VENTXP5-201ENST00000523979 775 ntBASIC14.38□□□□□ -0.11
BEST4Q8NFU0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 AC139887.4-201ENST00000607877 719 ntBASIC14.38□□□□□ -0.11
BEST4Q8NFU0 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 PPT1-215ENST00000641471 2368 ntBASIC14.38□□□□□ -0.11
BEST4Q8NFU0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.38□□□□□ -0.11
BEST4Q8NFU0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.38□□□□□ -0.11
BEST4Q8NFU0 AL353593.2-201ENST00000602529 1483 ntBASIC14.38□□□□□ -0.11
BEST4Q8NFU0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 BX664615.1-201ENST00000443558 458 ntBASIC14.37□□□□□ -0.11
BEST4Q8NFU0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 MIR600HG-201ENST00000449175 5984 ntBASIC14.37□□□□□ -0.11
BEST4Q8NFU0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.37□□□□□ -0.11
BEST4Q8NFU0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 FAM45BP-202ENST00000592932 1624 ntBASIC14.37□□□□□ -0.11
BEST4Q8NFU0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 CICP4-201ENST00000447359 2812 ntBASIC14.37□□□□□ -0.11
BEST4Q8NFU0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
BEST4Q8NFU0 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BEST4Q8NFU0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BEST4Q8NFU0 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
BEST4Q8NFU0 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
BEST4Q8NFU0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms