Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CDKL3Q8IVW4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 AL596087.1-201ENST00000400979 1969 ntBASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.04■□□□□ 0.32
CDKL3Q8IVW4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 PCDHA1-201ENST00000378133 2726 ntBASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 NFIC-211ENST00000641145 8399 ntBASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 AC021097.1-201ENST00000607902 574 ntBASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 AL645728.2-201ENST00000641974 660 ntBASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 AC022188.1-201ENST00000620960 1664 ntBASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDKL3Q8IVW4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDKL3Q8IVW4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms