Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 AC004832.2-201ENST00000426397 482 ntBASIC15.59■□□□□ 0.09
CCDC71Q8IV32 AC004967.1-201ENST00000453589 447 ntBASIC15.59■□□□□ 0.09
CCDC71Q8IV32 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 AC134684.3-201ENST00000641758 218 ntBASIC15.59■□□□□ 0.09
CCDC71Q8IV32 AL135999.2-201ENST00000622438 1686 ntBASIC15.59■□□□□ 0.09
CCDC71Q8IV32 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CCDC71Q8IV32 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
CCDC71Q8IV32 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC71Q8IV32 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC71Q8IV32 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC71Q8IV32 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.58■□□□□ 0.09
CCDC71Q8IV32 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CCDC71Q8IV32 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CCDC71Q8IV32 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 AL020989.1-201ENST00000422979 469 ntBASIC15.58■□□□□ 0.08
CCDC71Q8IV32 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 KRT18P2-201ENST00000447938 1258 ntBASIC15.58■□□□□ 0.08
CCDC71Q8IV32 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 AC079781.4-201ENST00000641908 219 ntBASIC15.58■□□□□ 0.08
CCDC71Q8IV32 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 CROCCP1-201ENST00000426910 5675 ntBASIC15.58■□□□□ 0.08
CCDC71Q8IV32 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 AC104640.1-201ENST00000562617 2109 ntBASIC15.58■□□□□ 0.08
CCDC71Q8IV32 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC71Q8IV32 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 ELK2BP-201ENST00000415014 1224 ntBASIC15.57■□□□□ 0.08
CCDC71Q8IV32 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 AC023824.1-201ENST00000562945 2975 ntBASIC15.57■□□□□ 0.08
CCDC71Q8IV32 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC71Q8IV32 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms