Protein–RNA interactions for Protein: Q86YW5

TREML1, Trem-like transcript 1 protein, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML1Q86YW5 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 TSPY22P-201ENST00000427496 604 ntBASIC16.07■□□□□ 0.16
TREML1Q86YW5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 ATP5G1P1-201ENST00000448724 379 ntBASIC16.07■□□□□ 0.16
TREML1Q86YW5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 MIR4492-201ENST00000581627 80 ntBASIC16.07■□□□□ 0.16
TREML1Q86YW5 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.07■□□□□ 0.16
TREML1Q86YW5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 SNX18-202ENST00000343017 3140 ntBASIC16.07■□□□□ 0.16
TREML1Q86YW5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREML1Q86YW5 AP003680.1-201ENST00000598970 3660 ntBASIC16.07■□□□□ 0.16
TREML1Q86YW5 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TREML1Q86YW5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 CICP24-201ENST00000605464 2705 ntBASIC16.06■□□□□ 0.16
TREML1Q86YW5 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 C8orf49-201ENST00000525043 1968 ntBASIC16.06■□□□□ 0.16
TREML1Q86YW5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 AL020989.1-201ENST00000422979 469 ntBASIC16.06■□□□□ 0.16
TREML1Q86YW5 BX664615.1-201ENST00000443558 458 ntBASIC16.06■□□□□ 0.16
TREML1Q86YW5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 AC012306.2-201ENST00000609350 630 ntBASIC16.06■□□□□ 0.16
TREML1Q86YW5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.06■□□□□ 0.16
TREML1Q86YW5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TREML1Q86YW5 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TREML1Q86YW5 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TREML1Q86YW5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TREML1Q86YW5 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREML1Q86YW5 GPAA1P2-202ENST00000606848 1787 ntBASIC16.05■□□□□ 0.16
TREML1Q86YW5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREML1Q86YW5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREML1Q86YW5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.05■□□□□ 0.16
TREML1Q86YW5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREML1Q86YW5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TREML1Q86YW5 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.05■□□□□ 0.16
TREML1Q86YW5 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.05■□□□□ 0.16
TREML1Q86YW5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.05■□□□□ 0.16
TREML1Q86YW5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREML1Q86YW5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.05■□□□□ 0.16
TREML1Q86YW5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREML1Q86YW5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TREML1Q86YW5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.05■□□□□ 0.16
TREML1Q86YW5 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TREML1Q86YW5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms