Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 AL445228.2-201ENST00000605589 952 ntBASIC16.72■□□□□ 0.27
RAPH1Q70E73 AL139424.1-201ENST00000607572 797 ntBASIC16.72■□□□□ 0.27
RAPH1Q70E73 AL589182.2-201ENST00000619332 1049 ntBASIC16.72■□□□□ 0.27
RAPH1Q70E73 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 AL139011.1-202ENST00000642063 584 ntBASIC16.72■□□□□ 0.27
RAPH1Q70E73 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 TOP3BP1-201ENST00000420768 1380 ntBASIC16.72■□□□□ 0.27
RAPH1Q70E73 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 AL136379.1-201ENST00000623471 2642 ntBASIC16.72■□□□□ 0.27
RAPH1Q70E73 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RAPH1Q70E73 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RAPH1Q70E73 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
RAPH1Q70E73 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RAPH1Q70E73 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAPH1Q70E73 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.71■□□□□ 0.26
RAPH1Q70E73 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
RAPH1Q70E73 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
RAPH1Q70E73 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.71■□□□□ 0.26
RAPH1Q70E73 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RAPH1Q70E73 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RAPH1Q70E73 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.7■□□□□ 0.26
RAPH1Q70E73 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.7■□□□□ 0.26
RAPH1Q70E73 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.7■□□□□ 0.26
RAPH1Q70E73 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RAPH1Q70E73 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.7■□□□□ 0.26
RAPH1Q70E73 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.7■□□□□ 0.26
RAPH1Q70E73 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.7■□□□□ 0.26
RAPH1Q70E73 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.7■□□□□ 0.26
RAPH1Q70E73 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.7■□□□□ 0.26
RAPH1Q70E73 AC139887.3-201ENST00000568585 713 ntBASIC16.7■□□□□ 0.26
RAPH1Q70E73 MIR3652-201ENST00000579335 131 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms