Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC38Q5VT99 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 SLC25A6P4-201ENST00000586535 553 ntBASIC17.17■□□□□ 0.34
LRRC38Q5VT99 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRRC38Q5VT99 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 AC008894.3-201ENST00000624324 3103 ntBASIC17.16■□□□□ 0.34
LRRC38Q5VT99 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 AC010507.1-201ENST00000633895 436 ntBASIC17.16■□□□□ 0.34
LRRC38Q5VT99 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 AC046158.3-201ENST00000624947 2558 ntBASIC17.16■□□□□ 0.34
LRRC38Q5VT99 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC38Q5VT99 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC38Q5VT99 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms