Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.13■□□□□ 0.01
CXCR4P61073 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CXCR4P61073 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.13■□□□□ 0.01
CXCR4P61073 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.13■□□□□ 0.01
CXCR4P61073 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.13■□□□□ 0.01
CXCR4P61073 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.13■□□□□ 0.01
CXCR4P61073 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.13■□□□□ 0.01
CXCR4P61073 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.13■□□□□ 0.01
CXCR4P61073 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.13■□□□□ 0.01
CXCR4P61073 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.13■□□□□ 0.01
CXCR4P61073 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.13■□□□□ 0.01
CXCR4P61073 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.13■□□□□ 0.01
CXCR4P61073 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.13■□□□□ 0.01
CXCR4P61073 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.13■□□□□ 0.01
CXCR4P61073 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CXCR4P61073 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CXCR4P61073 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.13■□□□□ 0.01
CXCR4P61073 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.13■□□□□ 0.01
CXCR4P61073 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.13■□□□□ 0.01
CXCR4P61073 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.13■□□□□ 0.01
CXCR4P61073 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.13■□□□□ 0.01
CXCR4P61073 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CXCR4P61073 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.12■□□□□ 0.01
CXCR4P61073 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CXCR4P61073 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.12■□□□□ 0.01
CXCR4P61073 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CXCR4P61073 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.12■□□□□ 0.01
CXCR4P61073 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.12■□□□□ 0.01
CXCR4P61073 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 DUX4L26-201ENST00000489078 1255 ntBASIC15.12■□□□□ 0.01
CXCR4P61073 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.12■□□□□ 0.01
CXCR4P61073 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CXCR4P61073 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
CXCR4P61073 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CXCR4P61073 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.12■□□□□ 0.01
CXCR4P61073 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXCR4P61073 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
CXCR4P61073 AC020658.6-201ENST00000623564 1870 ntBASIC15.12■□□□□ 0.01
CXCR4P61073 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.12■□□□□ 0.01
CXCR4P61073 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.12■□□□□ 0.01
CXCR4P61073 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.11■□□□□ 0.01
CXCR4P61073 AL009178.2-201ENST00000597278 2719 ntBASIC15.11■□□□□ 0.01
CXCR4P61073 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXCR4P61073 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.11■□□□□ 0.01
CXCR4P61073 KRT8P39-201ENST00000396270 1433 ntBASIC15.11■□□□□ 0.01
CXCR4P61073 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CXCR4P61073 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms