Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
MDH1P40925 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 AC092919.2-201ENST00000623631 1645 ntBASIC16.68■□□□□ 0.26
MDH1P40925 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 CICP23-201ENST00000605013 2741 ntBASIC16.68■□□□□ 0.26
MDH1P40925 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
MDH1P40925 FAM220CP-201ENST00000395253 831 ntBASIC16.68■□□□□ 0.26
MDH1P40925 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.68■□□□□ 0.26
MDH1P40925 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.68■□□□□ 0.26
MDH1P40925 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.68■□□□□ 0.26
MDH1P40925 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.68■□□□□ 0.26
MDH1P40925 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.68■□□□□ 0.26
MDH1P40925 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
MDH1P40925 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.68■□□□□ 0.26
MDH1P40925 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
MDH1P40925 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.67■□□□□ 0.26
MDH1P40925 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.67■□□□□ 0.26
MDH1P40925 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.67■□□□□ 0.26
MDH1P40925 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.67■□□□□ 0.26
MDH1P40925 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
MDH1P40925 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.67■□□□□ 0.26
MDH1P40925 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MDH1P40925 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
MDH1P40925 ECEL1P3-201ENST00000427961 737 ntBASIC16.67■□□□□ 0.26
MDH1P40925 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.67■□□□□ 0.26
MDH1P40925 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
MDH1P40925 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.67■□□□□ 0.26
MDH1P40925 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
MDH1P40925 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.67■□□□□ 0.26
MDH1P40925 LINC01144-201ENST00000626198 1710 ntBASIC16.67■□□□□ 0.26
MDH1P40925 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.67■□□□□ 0.26
MDH1P40925 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.67■□□□□ 0.26
MDH1P40925 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
MDH1P40925 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
MDH1P40925 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.67■□□□□ 0.26
MDH1P40925 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.67■□□□□ 0.26
MDH1P40925 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
MDH1P40925 AC007191.1-201ENST00000623179 2995 ntBASIC16.66■□□□□ 0.26
MDH1P40925 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.66■□□□□ 0.26
MDH1P40925 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MDH1P40925 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.66■□□□□ 0.26
MDH1P40925 HMGA1P5-201ENST00000412453 271 ntBASIC16.66■□□□□ 0.26
MDH1P40925 KLF4P1-201ENST00000412782 1185 ntBASIC16.66■□□□□ 0.26
MDH1P40925 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.66■□□□□ 0.26
MDH1P40925 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
MDH1P40925 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.66■□□□□ 0.26
MDH1P40925 LINC00528-201ENST00000600723 2160 ntBASIC16.66■□□□□ 0.26
MDH1P40925 FAM87A-204ENST00000613235 858 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms