Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL1P22362 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL1P22362 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 AP005117.1-202ENST00000581724 1908 ntBASIC14.24□□□□□ -0.13
CCL1P22362 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
CCL1P22362 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CCL1P22362 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.24□□□□□ -0.13
CCL1P22362 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL1P22362 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL1P22362 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL1P22362 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL1P22362 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.24□□□□□ -0.13
CCL1P22362 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL1P22362 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL1P22362 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CCL1P22362 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL1P22362 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL1P22362 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
CCL1P22362 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL1P22362 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL1P22362 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL1P22362 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL1P22362 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCL1P22362 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL1P22362 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CCL1P22362 AC108751.1-201ENST00000490852 363 ntBASIC14.23□□□□□ -0.13
CCL1P22362 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL1P22362 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 AL691432.3-201ENST00000621860 400 ntBASIC14.23□□□□□ -0.13
CCL1P22362 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL1P22362 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL1P22362 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL1P22362 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL1P22362 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL1P22362 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL1P22362 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL1P22362 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL1P22362 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCL1P22362 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL1P22362 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.22□□□□□ -0.13
CCL1P22362 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCL1P22362 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CCL1P22362 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCL1P22362 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.22□□□□□ -0.13
CCL1P22362 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCL1P22362 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCL1P22362 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms