Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
MSR1P21757 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.66□□□□□ -0.06
MSR1P21757 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MSR1P21757 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.66□□□□□ -0.06
MSR1P21757 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.66□□□□□ -0.06
MSR1P21757 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.66□□□□□ -0.06
MSR1P21757 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.66□□□□□ -0.06
MSR1P21757 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 IGLL3P-201ENST00000412472 434 ntBASIC14.66□□□□□ -0.06
MSR1P21757 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
MSR1P21757 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 HCG4B-203ENST00000450128 991 ntBASIC14.66□□□□□ -0.06
MSR1P21757 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.66□□□□□ -0.06
MSR1P21757 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.66□□□□□ -0.06
MSR1P21757 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.66□□□□□ -0.06
MSR1P21757 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.66□□□□□ -0.06
MSR1P21757 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 AL031432.2-201ENST00000566714 459 ntBASIC14.66□□□□□ -0.06
MSR1P21757 AL928711.1-201ENST00000570165 459 ntBASIC14.66□□□□□ -0.06
MSR1P21757 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.66□□□□□ -0.06
MSR1P21757 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.66□□□□□ -0.06
MSR1P21757 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.66□□□□□ -0.06
MSR1P21757 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.66□□□□□ -0.06
MSR1P21757 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
MSR1P21757 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
MSR1P21757 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
MSR1P21757 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
MSR1P21757 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.65□□□□□ -0.06
MSR1P21757 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MSR1P21757 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MSR1P21757 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.65□□□□□ -0.06
MSR1P21757 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MSR1P21757 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.65□□□□□ -0.06
MSR1P21757 AC096734.2-201ENST00000562054 433 ntBASIC14.65□□□□□ -0.06
MSR1P21757 AC145285.3-201ENST00000564603 959 ntBASIC14.65□□□□□ -0.06
MSR1P21757 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.65□□□□□ -0.06
MSR1P21757 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.65□□□□□ -0.06
MSR1P21757 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.65□□□□□ -0.06
MSR1P21757 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 AC020765.3-201ENST00000613051 740 ntBASIC14.65□□□□□ -0.06
MSR1P21757 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.65□□□□□ -0.06
MSR1P21757 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC14.65□□□□□ -0.06
MSR1P21757 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
MSR1P21757 PCGF3-213ENST00000620529 1899 ntBASIC14.65□□□□□ -0.06
MSR1P21757 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 AC104109.2-201ENST00000602919 1418 ntBASIC14.65□□□□□ -0.06
MSR1P21757 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MSR1P21757 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms