Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.78■□□□□ 0.76
POLR3DP05423 SLC25A39P2-201ENST00000537614 270 ntBASIC19.78■□□□□ 0.76
POLR3DP05423 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 AL138918.1-201ENST00000568306 659 ntBASIC19.78■□□□□ 0.76
POLR3DP05423 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.78■□□□□ 0.76
POLR3DP05423 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC19.78■□□□□ 0.76
POLR3DP05423 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 Z92544.3-201ENST00000624747 417 ntBASIC19.78■□□□□ 0.76
POLR3DP05423 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
POLR3DP05423 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
POLR3DP05423 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.78■□□□□ 0.76
POLR3DP05423 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
POLR3DP05423 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.78■□□□□ 0.76
POLR3DP05423 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
POLR3DP05423 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
POLR3DP05423 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
POLR3DP05423 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
POLR3DP05423 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
POLR3DP05423 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.78■□□□□ 0.76
POLR3DP05423 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.78■□□□□ 0.76
POLR3DP05423 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
POLR3DP05423 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR3DP05423 AL391256.1-201ENST00000443260 1855 ntBASIC19.77■□□□□ 0.76
POLR3DP05423 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR3DP05423 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
POLR3DP05423 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR3DP05423 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR3DP05423 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
POLR3DP05423 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
POLR3DP05423 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR3DP05423 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR3DP05423 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR3DP05423 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
POLR3DP05423 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
POLR3DP05423 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.77■□□□□ 0.76
POLR3DP05423 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.77■□□□□ 0.76
POLR3DP05423 AP000842.3-202ENST00000569238 1080 ntBASIC19.77■□□□□ 0.76
POLR3DP05423 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.77■□□□□ 0.76
POLR3DP05423 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
POLR3DP05423 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.77■□□□□ 0.76
POLR3DP05423 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.77■□□□□ 0.76
POLR3DP05423 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
POLR3DP05423 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.77■□□□□ 0.75
POLR3DP05423 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR3DP05423 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.75
POLR3DP05423 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR3DP05423 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
POLR3DP05423 KRT8P39-201ENST00000396270 1433 ntBASIC19.76■□□□□ 0.75
POLR3DP05423 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
POLR3DP05423 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.76■□□□□ 0.75
POLR3DP05423 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
POLR3DP05423 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
POLR3DP05423 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
POLR3DP05423 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR3DP05423 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
POLR3DP05423 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.76■□□□□ 0.75
POLR3DP05423 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.76■□□□□ 0.75
POLR3DP05423 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR3DP05423 AP002490.2-201ENST00000524791 560 ntBASIC19.76■□□□□ 0.75
POLR3DP05423 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR3DP05423 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.76■□□□□ 0.75
POLR3DP05423 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
POLR3DP05423 AP001059.3-201ENST00000619053 235 ntBASIC19.76■□□□□ 0.75
POLR3DP05423 AC084121.4-201ENST00000641598 221 ntBASIC19.76■□□□□ 0.75
POLR3DP05423 AF228730.8-201ENST00000642140 221 ntBASIC19.76■□□□□ 0.75
POLR3DP05423 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
POLR3DP05423 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
POLR3DP05423 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.76■□□□□ 0.75
POLR3DP05423 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
POLR3DP05423 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
POLR3DP05423 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
POLR3DP05423 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
POLR3DP05423 AC078925.2-201ENST00000624013 1973 ntBASIC19.75■□□□□ 0.75
POLR3DP05423 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms