Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD3O95983 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
MBD3O95983 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
MBD3O95983 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.04■□□□□ 0.64
MBD3O95983 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
MBD3O95983 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
MBD3O95983 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 LINC02228-204ENST00000642115 2962 ntBASIC19.03■□□□□ 0.64
MBD3O95983 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.03■□□□□ 0.64
MBD3O95983 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3O95983 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.03■□□□□ 0.64
MBD3O95983 AL353135.1-201ENST00000606729 504 ntBASIC19.03■□□□□ 0.64
MBD3O95983 AC073592.4-201ENST00000623827 446 ntBASIC19.03■□□□□ 0.64
MBD3O95983 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3O95983 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3O95983 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3O95983 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.03■□□□□ 0.64
MBD3O95983 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
MBD3O95983 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3O95983 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3O95983 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
MBD3O95983 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3O95983 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
MBD3O95983 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.03■□□□□ 0.64
MBD3O95983 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.03■□□□□ 0.64
MBD3O95983 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
MBD3O95983 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MBD3O95983 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.02■□□□□ 0.64
MBD3O95983 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.02■□□□□ 0.64
MBD3O95983 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC19.02■□□□□ 0.64
MBD3O95983 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
MBD3O95983 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC19.02■□□□□ 0.64
MBD3O95983 NORAD-201ENST00000565493 5339 ntBASIC19.02■□□□□ 0.64
MBD3O95983 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.02■□□□□ 0.64
MBD3O95983 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
MBD3O95983 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.02■□□□□ 0.64
MBD3O95983 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.02■□□□□ 0.64
MBD3O95983 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MBD3O95983 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MBD3O95983 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.02■□□□□ 0.63
MBD3O95983 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MBD3O95983 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
MBD3O95983 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
MBD3O95983 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
MBD3O95983 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC19.02■□□□□ 0.63
MBD3O95983 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.01■□□□□ 0.63
MBD3O95983 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.01■□□□□ 0.63
MBD3O95983 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC19.01■□□□□ 0.63
MBD3O95983 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MBD3O95983 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MBD3O95983 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
MBD3O95983 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MBD3O95983 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 AK4P3-201ENST00000418260 669 ntBASIC19.01■□□□□ 0.63
MBD3O95983 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
MBD3O95983 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.01■□□□□ 0.63
MBD3O95983 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.01■□□□□ 0.63
MBD3O95983 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.01■□□□□ 0.63
MBD3O95983 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
MBD3O95983 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.01■□□□□ 0.63
MBD3O95983 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.01■□□□□ 0.63
MBD3O95983 NFIC-211ENST00000641145 8399 ntBASIC19.01■□□□□ 0.63
MBD3O95983 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
MBD3O95983 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
MBD3O95983 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19■□□□□ 0.63
MBD3O95983 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19■□□□□ 0.63
MBD3O95983 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms