Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 Z83851.2-201ENST00000609564 659 ntBASIC15.92■□□□□ 0.14
SEMA3DO95025 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.92■□□□□ 0.14
SEMA3DO95025 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.92■□□□□ 0.14
SEMA3DO95025 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SEMA3DO95025 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEMA3DO95025 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEMA3DO95025 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.92■□□□□ 0.14
SEMA3DO95025 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SEMA3DO95025 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SEMA3DO95025 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SEMA3DO95025 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEMA3DO95025 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SEMA3DO95025 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SEMA3DO95025 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
SEMA3DO95025 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.92■□□□□ 0.14
SEMA3DO95025 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SEMA3DO95025 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.92■□□□□ 0.14
SEMA3DO95025 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.91■□□□□ 0.14
SEMA3DO95025 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SEMA3DO95025 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SEMA3DO95025 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.91■□□□□ 0.14
SEMA3DO95025 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SEMA3DO95025 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 IGLL3P-201ENST00000412472 434 ntBASIC15.91■□□□□ 0.14
SEMA3DO95025 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.91■□□□□ 0.14
SEMA3DO95025 HCG4B-203ENST00000450128 991 ntBASIC15.91■□□□□ 0.14
SEMA3DO95025 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.91■□□□□ 0.14
SEMA3DO95025 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.91■□□□□ 0.14
SEMA3DO95025 AC145285.3-201ENST00000564603 959 ntBASIC15.91■□□□□ 0.14
SEMA3DO95025 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.91■□□□□ 0.14
SEMA3DO95025 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.91■□□□□ 0.14
SEMA3DO95025 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.91■□□□□ 0.14
SEMA3DO95025 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.91■□□□□ 0.14
SEMA3DO95025 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.91■□□□□ 0.14
SEMA3DO95025 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SEMA3DO95025 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.91■□□□□ 0.14
SEMA3DO95025 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.9■□□□□ 0.14
SEMA3DO95025 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 GPAA1P2-202ENST00000606848 1787 ntBASIC15.9■□□□□ 0.14
SEMA3DO95025 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SEMA3DO95025 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.9■□□□□ 0.14
SEMA3DO95025 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SEMA3DO95025 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 AC096734.2-201ENST00000562054 433 ntBASIC15.9■□□□□ 0.14
SEMA3DO95025 AL031432.2-201ENST00000566714 459 ntBASIC15.9■□□□□ 0.14
SEMA3DO95025 AL928711.1-201ENST00000570165 459 ntBASIC15.9■□□□□ 0.14
SEMA3DO95025 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.9■□□□□ 0.14
SEMA3DO95025 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.9■□□□□ 0.14
SEMA3DO95025 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.9■□□□□ 0.14
SEMA3DO95025 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
SEMA3DO95025 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEMA3DO95025 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
SEMA3DO95025 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.9■□□□□ 0.14
SEMA3DO95025 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.9■□□□□ 0.14
SEMA3DO95025 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SEMA3DO95025 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEMA3DO95025 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEMA3DO95025 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SEMA3DO95025 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms