Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 PCDHA14-201ENST00000506751 2298 ntBASIC18.42■□□□□ 0.54
CLSTN1O94985 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.42■□□□□ 0.54
CLSTN1O94985 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.42■□□□□ 0.54
CLSTN1O94985 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.42■□□□□ 0.54
CLSTN1O94985 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC18.42■□□□□ 0.54
CLSTN1O94985 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 SLC25A1P3-201ENST00000395415 828 ntBASIC18.42■□□□□ 0.54
CLSTN1O94985 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.42■□□□□ 0.54
CLSTN1O94985 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.42■□□□□ 0.54
CLSTN1O94985 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.42■□□□□ 0.54
CLSTN1O94985 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.42■□□□□ 0.54
CLSTN1O94985 PGM5P2-202ENST00000637225 1043 ntBASIC18.42■□□□□ 0.54
CLSTN1O94985 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.42■□□□□ 0.54
CLSTN1O94985 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.42■□□□□ 0.54
CLSTN1O94985 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.42■□□□□ 0.54
CLSTN1O94985 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CLSTN1O94985 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
CLSTN1O94985 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.41■□□□□ 0.54
CLSTN1O94985 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
CLSTN1O94985 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.41■□□□□ 0.54
CLSTN1O94985 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.41■□□□□ 0.54
CLSTN1O94985 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.41■□□□□ 0.54
CLSTN1O94985 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.41■□□□□ 0.54
CLSTN1O94985 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 AL805961.1-202ENST00000641562 540 ntBASIC18.41■□□□□ 0.54
CLSTN1O94985 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 AL603756.1-201ENST00000606511 2163 ntBASIC18.41■□□□□ 0.54
CLSTN1O94985 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CLSTN1O94985 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.41■□□□□ 0.54
CLSTN1O94985 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.4■□□□□ 0.54
CLSTN1O94985 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLSTN1O94985 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.4■□□□□ 0.54
CLSTN1O94985 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.4■□□□□ 0.54
CLSTN1O94985 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.4■□□□□ 0.54
CLSTN1O94985 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLSTN1O94985 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.4■□□□□ 0.54
CLSTN1O94985 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.4■□□□□ 0.54
CLSTN1O94985 AC108751.1-201ENST00000490852 363 ntBASIC18.4■□□□□ 0.54
CLSTN1O94985 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.4■□□□□ 0.54
CLSTN1O94985 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CLSTN1O94985 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CLSTN1O94985 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.4■□□□□ 0.54
CLSTN1O94985 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.4■□□□□ 0.54
CLSTN1O94985 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CLSTN1O94985 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
CLSTN1O94985 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CLSTN1O94985 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CLSTN1O94985 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms