Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE3O75131 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE3O75131 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CPNE3O75131 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.96■□□□□ 0.15
CPNE3O75131 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE3O75131 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE3O75131 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE3O75131 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CPNE3O75131 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE3O75131 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CPNE3O75131 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE3O75131 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE3O75131 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE3O75131 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.95■□□□□ 0.14
CPNE3O75131 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.95■□□□□ 0.14
CPNE3O75131 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.95■□□□□ 0.14
CPNE3O75131 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.95■□□□□ 0.14
CPNE3O75131 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE3O75131 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE3O75131 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CPNE3O75131 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.95■□□□□ 0.14
CPNE3O75131 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CPNE3O75131 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE3O75131 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
CPNE3O75131 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE3O75131 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE3O75131 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.94■□□□□ 0.14
CPNE3O75131 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE3O75131 DUX4L17-201ENST00000557360 1267 ntBASIC15.94■□□□□ 0.14
CPNE3O75131 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CPNE3O75131 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.94■□□□□ 0.14
CPNE3O75131 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.94■□□□□ 0.14
CPNE3O75131 MIR3909-201ENST00000579518 119 ntBASIC15.94■□□□□ 0.14
CPNE3O75131 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE3O75131 AL031055.1-201ENST00000606362 631 ntBASIC15.94■□□□□ 0.14
CPNE3O75131 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.94■□□□□ 0.14
CPNE3O75131 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CPNE3O75131 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 PCDHB19P-201ENST00000570871 2371 ntBASIC15.94■□□□□ 0.14
CPNE3O75131 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE3O75131 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CPNE3O75131 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE3O75131 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE3O75131 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.94■□□□□ 0.14
CPNE3O75131 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CPNE3O75131 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPNE3O75131 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.94■□□□□ 0.14
CPNE3O75131 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.93■□□□□ 0.14
CPNE3O75131 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPNE3O75131 SLC22A20-204ENST00000530038 1673 ntBASIC15.93■□□□□ 0.14
CPNE3O75131 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.93■□□□□ 0.14
CPNE3O75131 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CPNE3O75131 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CPNE3O75131 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.93■□□□□ 0.14
CPNE3O75131 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.93■□□□□ 0.14
CPNE3O75131 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CPNE3O75131 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms