Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
ZIC3O60481 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 ALOX12P2-203ENST00000570921 1945 ntBASIC14.87□□□□□ -0.03
ZIC3O60481 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.87□□□□□ -0.03
ZIC3O60481 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.87□□□□□ -0.03
ZIC3O60481 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
ZIC3O60481 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
ZIC3O60481 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC3O60481 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC3O60481 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC3O60481 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC3O60481 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
ZIC3O60481 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.86□□□□□ -0.03
ZIC3O60481 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC3O60481 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.86□□□□□ -0.03
ZIC3O60481 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC3O60481 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ZIC3O60481 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC3O60481 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC3O60481 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 AL512356.2-201ENST00000546955 174 ntBASIC14.86□□□□□ -0.03
ZIC3O60481 AC026150.2-201ENST00000564693 1156 ntBASIC14.86□□□□□ -0.03
ZIC3O60481 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.86□□□□□ -0.03
ZIC3O60481 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.86□□□□□ -0.03
ZIC3O60481 AP001059.3-201ENST00000619053 235 ntBASIC14.86□□□□□ -0.03
ZIC3O60481 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC3O60481 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
ZIC3O60481 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.86□□□□□ -0.03
ZIC3O60481 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
ZIC3O60481 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ZIC3O60481 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC3O60481 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.85□□□□□ -0.03
ZIC3O60481 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.85□□□□□ -0.03
ZIC3O60481 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC3O60481 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
ZIC3O60481 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
ZIC3O60481 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.85□□□□□ -0.03
ZIC3O60481 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 AC025678.2-201ENST00000562061 970 ntBASIC14.85□□□□□ -0.03
ZIC3O60481 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC3O60481 AC093028.1-201ENST00000622998 982 ntBASIC14.85□□□□□ -0.03
ZIC3O60481 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.85□□□□□ -0.03
ZIC3O60481 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.85□□□□□ -0.03
ZIC3O60481 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.85□□□□□ -0.03
ZIC3O60481 AP3S2-216ENST00000617003 1561 ntBASIC14.85□□□□□ -0.03
ZIC3O60481 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
ZIC3O60481 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms