Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
RNF13O43567 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF13O43567 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.14■□□□□ 0.01
RNF13O43567 RPS15P9-201ENST00000494093 319 ntBASIC15.14■□□□□ 0.01
RNF13O43567 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.14■□□□□ 0.01
RNF13O43567 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF13O43567 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 GGTLC5P-201ENST00000617623 998 ntBASIC15.14■□□□□ 0.01
RNF13O43567 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF13O43567 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
RNF13O43567 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF13O43567 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF13O43567 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF13O43567 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF13O43567 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF13O43567 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF13O43567 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF13O43567 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF13O43567 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF13O43567 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF13O43567 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF13O43567 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 AC004870.1-201ENST00000315132 882 ntBASIC15.13■□□□□ 0.01
RNF13O43567 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF13O43567 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.13■□□□□ 0.01
RNF13O43567 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF13O43567 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 AC013467.2-201ENST00000605472 835 ntBASIC15.13■□□□□ 0.01
RNF13O43567 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.13■□□□□ 0.01
RNF13O43567 AC008735.5-201ENST00000623544 497 ntBASIC15.13■□□□□ 0.01
RNF13O43567 TP73-AS1-207ENST00000624167 988 ntBASIC15.13■□□□□ 0.01
RNF13O43567 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RNF13O43567 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RNF13O43567 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF13O43567 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RNF13O43567 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF13O43567 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.12■□□□□ 0.01
RNF13O43567 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 AC006538.1-201ENST00000567905 1585 ntBASIC15.12■□□□□ 0.01
RNF13O43567 MTHFR-217ENST00000641820 1569 ntBASIC15.12■□□□□ 0.01
RNF13O43567 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.12■□□□□ 0.01
RNF13O43567 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
RNF13O43567 KRT18P27-201ENST00000427733 1299 ntBASIC15.12■□□□□ 0.01
RNF13O43567 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF13O43567 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
RNF13O43567 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms