Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 TOB2P1-201ENST00000469761 992 ntBASIC16.86■□□□□ 0.29
RIPK2O43353 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.86■□□□□ 0.29
RIPK2O43353 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.86■□□□□ 0.29
RIPK2O43353 REXO1L3P-201ENST00000622202 1288 ntBASIC16.86■□□□□ 0.29
RIPK2O43353 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RIPK2O43353 AL136379.1-201ENST00000623471 2642 ntBASIC16.86■□□□□ 0.29
RIPK2O43353 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RIPK2O43353 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.86■□□□□ 0.29
RIPK2O43353 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RIPK2O43353 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RIPK2O43353 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.86■□□□□ 0.29
RIPK2O43353 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIPK2O43353 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIPK2O43353 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIPK2O43353 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RIPK2O43353 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIPK2O43353 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIPK2O43353 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIPK2O43353 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIPK2O43353 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RIPK2O43353 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
RIPK2O43353 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
RIPK2O43353 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.85■□□□□ 0.29
RIPK2O43353 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.85■□□□□ 0.29
RIPK2O43353 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.85■□□□□ 0.29
RIPK2O43353 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RIPK2O43353 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RIPK2O43353 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RIPK2O43353 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RIPK2O43353 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 MIR648-201ENST00000385046 94 ntBASIC16.85■□□□□ 0.29
RIPK2O43353 PRYP5-201ENST00000451909 266 ntBASIC16.85■□□□□ 0.29
RIPK2O43353 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.85■□□□□ 0.29
RIPK2O43353 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.85■□□□□ 0.29
RIPK2O43353 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.85■□□□□ 0.29
RIPK2O43353 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.85■□□□□ 0.29
RIPK2O43353 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.85■□□□□ 0.29
RIPK2O43353 AC064862.7-201ENST00000604520 867 ntBASIC16.85■□□□□ 0.29
RIPK2O43353 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.85■□□□□ 0.29
RIPK2O43353 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
RIPK2O43353 NCF1C-201ENST00000438382 1427 ntBASIC16.85■□□□□ 0.29
RIPK2O43353 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.85■□□□□ 0.29
RIPK2O43353 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.85■□□□□ 0.29
RIPK2O43353 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.85■□□□□ 0.29
RIPK2O43353 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.85■□□□□ 0.29
RIPK2O43353 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RIPK2O43353 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.84■□□□□ 0.29
RIPK2O43353 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.84■□□□□ 0.29
RIPK2O43353 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.84■□□□□ 0.29
RIPK2O43353 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RIPK2O43353 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 POM121L3P-201ENST00000419331 1163 ntBASIC16.84■□□□□ 0.29
RIPK2O43353 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.84■□□□□ 0.29
RIPK2O43353 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.84■□□□□ 0.29
RIPK2O43353 TSSC2-201ENST00000450217 709 ntBASIC16.84■□□□□ 0.29
RIPK2O43353 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.84■□□□□ 0.29
RIPK2O43353 DUX4L26-201ENST00000489078 1255 ntBASIC16.84■□□□□ 0.29
RIPK2O43353 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 AC091167.2-201ENST00000579581 588 ntBASIC16.84■□□□□ 0.29
RIPK2O43353 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.84■□□□□ 0.29
RIPK2O43353 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.84■□□□□ 0.29
RIPK2O43353 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.84■□□□□ 0.29
RIPK2O43353 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RIPK2O43353 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RIPK2O43353 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.84■□□□□ 0.29
RIPK2O43353 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.84■□□□□ 0.29
RIPK2O43353 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RIPK2O43353 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RIPK2O43353 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
RIPK2O43353 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
RIPK2O43353 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RIPK2O43353 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
RIPK2O43353 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIPK2O43353 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms