Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
PHF1O43189 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PHF1O43189 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.4□□□□□ -0.1
PHF1O43189 AC073621.1-201ENST00000392730 636 ntBASIC14.4□□□□□ -0.1
PHF1O43189 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.4□□□□□ -0.1
PHF1O43189 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PHF1O43189 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.4□□□□□ -0.1
PHF1O43189 AC108751.1-201ENST00000490852 363 ntBASIC14.4□□□□□ -0.1
PHF1O43189 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PHF1O43189 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.4□□□□□ -0.1
PHF1O43189 AC004706.3-202ENST00000621574 984 ntBASIC14.4□□□□□ -0.1
PHF1O43189 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.4□□□□□ -0.1
PHF1O43189 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PHF1O43189 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PHF1O43189 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.4□□□□□ -0.1
PHF1O43189 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PHF1O43189 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PHF1O43189 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
PHF1O43189 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
PHF1O43189 AL162727.3-201ENST00000635661 2787 ntBASIC14.39□□□□□ -0.11
PHF1O43189 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.39□□□□□ -0.11
PHF1O43189 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.39□□□□□ -0.11
PHF1O43189 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.39□□□□□ -0.11
PHF1O43189 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.39□□□□□ -0.11
PHF1O43189 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
PHF1O43189 RNF216P1-203ENST00000404404 2427 ntBASIC14.39□□□□□ -0.11
PHF1O43189 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
PHF1O43189 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.39□□□□□ -0.11
PHF1O43189 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.39□□□□□ -0.11
PHF1O43189 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.39□□□□□ -0.11
PHF1O43189 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 AL096865.1-201ENST00000606796 927 ntBASIC14.39□□□□□ -0.11
PHF1O43189 C20orf181-201ENST00000623918 480 ntBASIC14.39□□□□□ -0.11
PHF1O43189 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.39□□□□□ -0.11
PHF1O43189 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.39□□□□□ -0.11
PHF1O43189 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PHF1O43189 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
PHF1O43189 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PHF1O43189 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PHF1O43189 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.38□□□□□ -0.11
PHF1O43189 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.38□□□□□ -0.11
PHF1O43189 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms