Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
USP17L11C9JVI0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.12■□□□□ 0.65
USP17L11C9JVI0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 OR6D1P-202ENST00000641007 5290 ntBASIC19.12■□□□□ 0.65
USP17L11C9JVI0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
USP17L11C9JVI0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 GK-202ENST00000378941 458 ntTSL 3 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 RPL37AP1-201ENST00000412502 279 ntBASIC19.11■□□□□ 0.65
USP17L11C9JVI0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 RNA5SP410-201ENST00000516285 106 ntBASIC19.11■□□□□ 0.65
USP17L11C9JVI0 CR383656.12-201ENST00000549567 513 ntBASIC19.11■□□□□ 0.65
USP17L11C9JVI0 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 AC105021.1-202ENST00000570572 669 ntBASIC19.11■□□□□ 0.65
USP17L11C9JVI0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
USP17L11C9JVI0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP17L11C9JVI0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
USP17L11C9JVI0 AL603756.1-201ENST00000606511 2163 ntBASIC19.1■□□□□ 0.65
USP17L11C9JVI0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
USP17L11C9JVI0 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
USP17L11C9JVI0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
USP17L11C9JVI0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.1■□□□□ 0.65
USP17L11C9JVI0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.1■□□□□ 0.65
USP17L11C9JVI0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.1■□□□□ 0.65
USP17L11C9JVI0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.1■□□□□ 0.65
USP17L11C9JVI0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms