Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 AC022532.1-201ENST00000624563 1728 ntBASIC17.62■□□□□ 0.41
RCCD1A6NED2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 AC025062.2-201ENST00000605477 670 ntBASIC17.62■□□□□ 0.41
RCCD1A6NED2 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 OR6D1P-203ENST00000641209 4860 ntBASIC17.62■□□□□ 0.41
RCCD1A6NED2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RCCD1A6NED2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RCCD1A6NED2 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 AC068418.2-201ENST00000577309 3703 ntBASIC17.61■□□□□ 0.41
RCCD1A6NED2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.61■□□□□ 0.41
RCCD1A6NED2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RCCD1A6NED2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 AC087641.1-201ENST00000557561 1021 ntBASIC17.6■□□□□ 0.41
RCCD1A6NED2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.6■□□□□ 0.41
RCCD1A6NED2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RCCD1A6NED2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms