Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PTPDC1A2A3K4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 AC087641.1-201ENST00000557561 1021 ntBASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PTPDC1A2A3K4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PTPDC1A2A3K4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 AC112191.1-201ENST00000523689 701 ntBASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 AL391005.1-201ENST00000623953 2435 ntBASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PTPDC1A2A3K4 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms