Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV1A0A0A0MS02 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
TRGV1A0A0A0MS02 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AMT-206ENST00000458307 1860 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AC073621.1-201ENST00000392730 636 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 TPM4P1-201ENST00000436100 807 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 SLC25A6P2-201ENST00000497974 877 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 MPDU1-223ENST00000582151 728 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AC008667.4-201ENST00000607370 168 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AC148477.8-201ENST00000624298 468 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AP001350.2-201ENST00000625104 1094 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 FAM215A-202ENST00000632077 792 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 AC006538.1-201ENST00000567905 1585 ntBASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.08□□□□□ -0.48
TRGV1A0A0A0MS02 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 PCDHB19P-201ENST00000570871 2371 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 AL662844.4-201ENST00000606367 2838 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 WT1-209ENST00000530998 2421 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 MRPL20P1-201ENST00000400819 433 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 AL031284.1-201ENST00000419297 478 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 HLA-J-202ENST00000469281 1241 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 AP002469.2-201ENST00000531724 424 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 MIR4751-201ENST00000578027 74 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 AC091167.2-201ENST00000579581 588 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 AC013467.2-201ENST00000605472 835 ntBASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
TRGV1A0A0A0MS02 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms