Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PCDHGA9Q9Y5G4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 IGHV3-42-201ENST00000520410 361 ntBASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 AC069120.2-201ENST00000524091 540 ntBASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 AC005225.4-201ENST00000557330 545 ntBASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 AC012645.4-201ENST00000610691 1061 ntBASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PCDHGA9Q9Y5G4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 TREML5P-201ENST00000421694 576 ntBASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 AL512638.1-201ENST00000457493 794 ntBASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 SLC25A39P2-201ENST00000537614 270 ntBASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 AC091167.2-201ENST00000579581 588 ntBASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 AL390754.1-201ENST00000619088 582 ntBASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 AC008761.3-201ENST00000624803 892 ntBASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.52■□□□□ 0.08
PCDHGA9Q9Y5G4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 LYSMD4-203ENST00000378904 2122 ntBASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.52■□□□□ 0.07
PCDHGA9Q9Y5G4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 ALG1L8P-201ENST00000533887 760 ntBASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 MIR6080-201ENST00000617359 66 ntBASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHGA9Q9Y5G4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms