Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGB4Q9UN71 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 AL021920.2-201ENST00000624828 1351 ntBASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 MIR1224-201ENST00000408193 85 ntBASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 SPDYE21P-201ENST00000413323 827 ntBASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 ABCD1P5-201ENST00000445663 754 ntBASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 KRT18P35-201ENST00000510488 1269 ntBASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 AC010331.1-201ENST00000611423 582 ntBASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGB4Q9UN71 NORAD-201ENST00000565493 5339 ntBASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 ALOX12P2-203ENST00000570921 1945 ntBASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 AP002414.2-201ENST00000591780 3365 ntBASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
PCDHGB4Q9UN71 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGB4Q9UN71 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.14■□□□□ 0.18
PCDHGB4Q9UN71 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCDHGB4Q9UN71 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 SIGLEC16-201ENST00000599858 1437 ntBASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGB4Q9UN71 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms