Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NDE1Q9NXR1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 MMP23A-201ENST00000234610 1017 ntBASIC16.12■□□□□ 0.17
NDE1Q9NXR1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 ACTG1P4-201ENST00000425123 1122 ntBASIC16.12■□□□□ 0.17
NDE1Q9NXR1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 GUSBP12-201ENST00000513727 720 ntBASIC16.12■□□□□ 0.17
NDE1Q9NXR1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NDE1Q9NXR1 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 AC023157.3-201ENST00000619086 2088 ntBASIC16.11■□□□□ 0.17
NDE1Q9NXR1 PPT1-215ENST00000641471 2368 ntBASIC16.11■□□□□ 0.17
NDE1Q9NXR1 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
NDE1Q9NXR1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms