Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 AL031731.1-201ENST00000642131 2094 ntBASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
VAT1LQ9HCJ6 AC006538.1-201ENST00000567905 1585 ntBASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 KRT18P32-201ENST00000424695 1287 ntBASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 LINC00628-201ENST00000628516 1289 ntBASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VAT1LQ9HCJ6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 SLC25A39P2-201ENST00000537614 270 ntBASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 AC027796.2-201ENST00000575326 344 ntBASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 AC008267.7-201ENST00000624570 1194 ntBASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
VAT1LQ9HCJ6 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VAT1LQ9HCJ6 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms