Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COMMD4Q9H0A8 AL161772.1-201ENST00000610494 4412 ntBASIC14.73□□□□□ -0.05
COMMD4Q9H0A8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COMMD4Q9H0A8 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COMMD4Q9H0A8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COMMD4Q9H0A8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COMMD4Q9H0A8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.73□□□□□ -0.05
COMMD4Q9H0A8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.73□□□□□ -0.05
COMMD4Q9H0A8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 LINC00265-3P-201ENST00000447588 903 ntBASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 TPSP2-201ENST00000561760 610 ntBASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 AL590326.2-201ENST00000625139 305 ntBASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 TOP3BP1-201ENST00000420768 1380 ntBASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COMMD4Q9H0A8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 AC079776.2-201ENST00000641154 1609 ntBASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 ABCD1P5-201ENST00000445663 754 ntBASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 AC074051.2-201ENST00000565115 352 ntBASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 AC073592.4-201ENST00000623827 446 ntBASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
COMMD4Q9H0A8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
COMMD4Q9H0A8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
COMMD4Q9H0A8 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
COMMD4Q9H0A8 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
COMMD4Q9H0A8 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 AL590787.1-201ENST00000568856 1315 ntBASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.7□□□□□ -0.06
COMMD4Q9H0A8 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms