Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SHANK2-AS3Q9BTD1 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 PMS2P1-201ENST00000431037 1228 ntBASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 SLC22A20-204ENST00000530038 1673 ntBASIC12.8□□□□□ -0.36
SHANK2-AS3Q9BTD1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 SLC25A6P2-201ENST00000497974 877 ntBASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 SART3-203ENST00000546611 1184 ntBASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC087641.1-201ENST00000557561 1021 ntBASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC093458.2-201ENST00000623150 629 ntBASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 AC011270.2-201ENST00000624293 2550 ntBASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC12.79□□□□□ -0.36
SHANK2-AS3Q9BTD1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.78□□□□□ -0.36
SHANK2-AS3Q9BTD1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms